Unique temperature-sensitive defect in vaccinia virus morphogenesis maps to a single nucleotide substitution in the A30L gene

Marker rescue experiments demonstrated that the genetic lesion of a previously isolated vaccinia virus temperature-sensitive mutant which forms multilayered envelope structures with lucent interiors and foci of viroplasm with dense centers mapped to the A30L open reading frame. A single base change, resulting in a nonconservative Ser-to-Phe substitution at residue 17, was associated with degradation of the A30L protein at elevated temperatures.     

A comparison of scar revision with the free electron and carbon dioxide resurfacing lasers

Laser scar revision was studied to measure the effects of targeting extracellular matrix protein versus tissue water on scar revision. We compared the free electron laser used at 7.7 microm (the amide III protein absorption band) to the carbon dioxide (CO2) laser and dermabrasion.Nude mice (n = 40) that had rejected skin grafts on their dorsal surface and developed mature scars were used as a model for scar revision. One-half of each scar was revised with either the free electron laser at 7.7 microm (32 to 38 mJ, nonoverlapping pulses delivered with a computerized adjustable pattern generator at 30 Hz, and two to three passes), a 100-microsec CO2 resurfacing laser (500 mJ, 5.0 Hz, and two to five passes), or dermabrasion. The untreated portion of each scar served as an internal control. Evaluation was by measurement of the clinical size of the scar using photography with quantitative computer image analysis to compare the data and histology to evaluate the quality and depth of the scars.The free electron laser at 7.7 microm was significantly better than the CO2 laser and dermabrasion for scar size reduction (p < 0.046 and p < 0.018). The CO2 laser and a highly skilled dermabrader were not statistically significantly different (p < 0.44). The result seen with less skilled dermabraders was significantly worse than all other methods (p < 0.009).The free electron laser at 7.7 microm, which is preferentially absorbed by the proteins of the extracellular matrix, provided better scar reduction than the CO2 resurfacing laser and dermabrasion. Dermabrasion by a skilled operator resulted in improvement similar to the results obtained with the CO2 resurfacing laser, but less skilled operators had significantly poorer results.     

The effects of predation by the mummichog, Fundulus heteroclitus (L.), on the abundance and distribution of the salt marsh snail, Melampus bidentatus (Say)

Enclosure and exclosure experiments were conducted in Canary Creek marsh to examine how predation by a killifish, Fundulus heteroclitus (L.), affects the abundance and size distribution of the salt marsh snail, Melampus bidentatus (Say). Enclosures (7.6 × 19.7 m) were stocked with Fundulus heteroclitus at densities of one-half normal, normal, twice normal, and four times normal density. Fish exclusion pens were also built. In both years of study, the mean density of snails increased significantly in pens where fish were excluded or their density reduced. During the same period in each year, the density of snails in pens containing higher than normal fish density fell by ≈50%.

Fish density also affected the size distribution of snails within pens. In both years, mean shell length of snails in the pen with the highest density of fish was significantly greater, and mean shell length of snails within fish exclusion pens was significantly lower than in all other treatments. Gape size limitation of F. heteroclitus causes selective predation on small snails and apparently is responsible for the difference in mean shell length among treatments.

Density and size distribution measurements of the natural Melampus bidentatus population in Canary Creek marsh were also taken. Larger snails were found to occur in the low marsh zone, whereas smaller snails occurred in the high marsh zone. Since the high marsh area is flooded less often than the low marsh, and the grass types found in the high marsh zone are known to afford protection from fish predation, the distribution of snails in the marsh is consistent with the idea that fish predation is an important factor influencing the distribution of snails in Canary Creek marsh.     

Primary structure of the hip gene of Escherichia coli and of its product,the β subunit of integration host factor

We describe the isolation and sequencing of the hip gene of Escherichia coli and show that it encodes the β subunit of integration host factor (IHFβ). In order to locate the coding region, we constructed a set of deletion mutants by exonucleolytic digestion of a fragment containing hip, determined which mutants were hip⁺ and which hip^? by complementation, and then sequenced the ends of the critical deletions. The 5′ end of the coding region was located precisely by comparing the deduced amino acid sequence to the actual N-terminal amino acid sequence of IHF. Our assignment of the coding region was further substantiated by the nucleotide sequences of a hip point mutant and of internal replacement mutations. We found a probable promoter for hip located about 85 base-pairs upstream from the initial AUG codon and about 75 base-pairs downstream from the 3′ end of the neighboring gene. rpsA, and we constructed an IHFβ overproducer by fusing the coding sequences to the λp_L promoter. A survey of known protein sequences revealed a close relationship between IHFβ and the type II prokaryotic DNA binding proteins (the “histone-like” proteins). This relationship is shared to a considerable extent by the other subunit of IHF, IHFα. A hip missense mutation that replaces a completely conserved glycine with aspartate has a null phenotype, suggesting that the conserved regions are functionally important.     

The Landscape Similarity Toolbox: new tools for optimizing the location of control sites in experimental studies

Large‐scale manipulative experiments are critically important for linking ecological theory with land management at a relevant spatial scale. Statistically powerful inferential approaches such as the before‐after‐control‐impact design involve pairing a small number of treatment sites with control sites of analogous ecological structure and landscape context. Pairing treatment and control sites that are as analogous as possible is an important step to ensuring that differences are due to a treatment effect. The Landscape Similarity Toolbox provides tools for optimizing the location of potential control sites based upon the spatial characteristics of the treatment site.     

Gallery Forest or Herbaceous Wetland? The Need for Multi‐Target Perspectives in Riparian Restoration Planning

Much riparian restoration focuses on establishment of gallery forests, with relatively limited effort to restore herbaceous wetlands as key components of riparian landscape mosaics. Multiple reasons for this include inherent cultural or esthetic preferences, greater availability of scientific knowledge to support riparian forest restoration, and choices of ecological indicators commonly used for monitoring and assessment. Yet riparian herbaceous wetlands have declined dramatically as a result of river regulation and agricultural development, leading to losses of important habitats and ecosystem services that differ from those provided by gallery forests. As an alternative to a single‐minded focus on tree establishment, we advocate restoration of diverse and dynamic habitat mosaics in the context of natural variability of flow and sediment regimes. Landscape context should inform active restoration activities at the local scale, such that riparian forests are not planted in ecologically inappropriate sites. Models are needed to match life history requirements of particular wetland herbaceous plant species with details of flow and sediment transport regimes. We emphasize the importance of herbaceous wetlands as a critical and often overlooked component of riparian ecosystems, and the need for both passive and active restoration of fluvial marshes, sloughs, wet meadows, alkali meadows, off‐channel ephemeral ponds, and other critical floodplain communities associated with herbaceous plant dominance.     

Notes on Scleroderma,Puff balls and Geastrum of Azad Jammu and Kashmir,Pakistan

Six species of mushrooms allied to the Family Sclerodermataceae, Lycoperdaceae and Geastraceae have been described for the first time from Azad Jammu and Kashmir. These are Scleroderma aurantium, Calvatia verrucosia sp. nov., Lycoperdon pedicellaton sp. nov. L. sphaericon sp. nov., L. echinulaton sp. nov., and Geastrum heptaplex sp. nov.